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Intron Name: Anas_platyrhynchos_platyrhynchos_7_26503361_26507291_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

26503361 - 26507291

Intron Length:

3931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTACCAAGT

5'SS Class:

weak_major

3'SS Sequence:

CCCCCCGGCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCAGAC

U12 Branch Point Sequence:

GCGGGCAGACCC

Flanking Amino Acid:

MFYDCPGSGAPPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.3

59.5

45.1

Major BPS

42.6

-0.4

1.2

32.1

34.8

Major PPT

48.5

-0

30.9

Minor 5ss

42.1

-0.9

3.3

61.9

42.9

Minor BPS

33.5

-1.2

36.23

40.7

Associated Gene:

Gene:

HOXD13

Ensembl Gene ID:

ENSAPLG00000008742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009089

26503352 - 26508755

5404