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Intron Name: Anas_platyrhynchos_platyrhynchos_7_26507740_26508504_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26507740 - 26508504

Intron Length:

765

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTACAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTCACATAATG

Flanking Amino Acid:

SSHFWKSSFPGDVALNQPDM

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.2

39.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

74.1

0.54

0.9

71.2

33.2

Minor 5ss

28.7

-2.4

3.4

37.6

47.2

Minor BPS

54.8

0.01

1.9

67.27

Associated Gene:

Gene:

HOXD13

Ensembl Gene ID:

ENSAPLG00000008742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009089

26503352 - 26508755

5404