Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_26532356_26533774_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26532356 - 26533774

Intron Length:

1419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTATT

5'SS Class:

major

3'SS Sequence:

TTGATTTTGATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTCCTTTGATT

Flanking Amino Acid:

SPEVQEKESKEEIKSDTPTS

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.3

83.5

35.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

71.4

0.48

68.9

41.9

Minor 5ss

43.2

-0.7

2.6

60.2

44.3

Minor BPS

69.8

0.7

1.2

80.03

36.4

Associated Gene:

Gene:

HOXD10

Ensembl Gene ID:

ENSAPLG00000008956

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009310

26531418 - 26534052

2635