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Intron Name: Anas_platyrhynchos_platyrhynchos_7_26566512_26566913_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26566512 - 26566913

Intron Length:

402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGATC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTCTCCGTATTT

Flanking Amino Acid:

PWMKKVHVNSVNPNYSGGEP

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

76.9

38.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

87.7

0.85

0.7

Minor 5ss

36.4

-1.5

3.3

43.8

Minor BPS

54.9

0.23

2.3

79.24

43.6

Associated Gene:

Gene:

HOXD4

Ensembl Gene ID:

ENSAPLG00000008983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009341

26566103 - 26567218

1116