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Intron Name: Anas_platyrhynchos_platyrhynchos_7_26619256_26631103_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26619256 - 26631103

Intron Length:

11848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATGT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGCTTTTTAAAT

Flanking Amino Acid:

SDNASSLAVQAFLQMCNLPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

36.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

82.4

0.73

0.9

76.3

37.7

Minor 5ss

-1.2

3.2

56.6

47.5

Minor BPS

66.8

0.6

1.4

77.19

39.4

Associated Gene:

Gene:

MTX2

Ensembl Gene ID:

ENSAPLG00000009123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009525

26610417 - 26637977

27561