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Intron Name: Anas_platyrhynchos_platyrhynchos_7_26682_27631_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26682 - 27631

Intron Length:

950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TACTTACTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

ATTTACTTACTT

Flanking Amino Acid:

FDHRVLESISDVCSTEDLPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

71.5

41.1

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

77.1

0.61

0.8

74.6

34.9

Minor 5ss

39.7

-1.2

2.8

46.4

44.2

Minor BPS

64.8

0.54

1.8

83.35

37.8

Associated Gene:

Gene:

TRAK2

Ensembl Gene ID:

ENSAPLG00000014773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042096

26351 - 43961

17611

ENSAPLT00000015441

26351 - 43887

17537