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Intron Name: Anas_platyrhynchos_platyrhynchos_7_267926_268145_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

267926 - 268145

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCATTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATTAACA

Flanking Amino Acid:

QNPYAIYASKGIHRSCKINL

Intron Amino Acid Position:

1269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

75.9

0.58

70.9

38.2

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

79.6

0.93

1.5

87.53

29.4

Associated Gene:

Gene:

AOX1

Ensembl Gene ID:

ENSAPLG00000008708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045156

267812 - 306968

39157