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Intron Name: Anas_platyrhynchos_platyrhynchos_7_268335_268517_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

268335 - 268517

Intron Length:

183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGAAAG

5'SS Class:

major

3'SS Sequence:

TTCTTATTGAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTTTTCTTATTG

Flanking Amino Acid:

SVQHGCTSLSD*

Intron Amino Acid Position:

1222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

64.3

41.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

67.8

0.4

1.2

Minor 5ss

31.6

-2.1

3.2

36.4

41.9

Minor BPS

61.9

0.24

1.7

66.23

42.5

Associated Gene:

Gene:

AOX1

Ensembl Gene ID:

ENSAPLG00000008708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009339

268146 - 306968

38823