Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_26837777_26933040_R

Intron Information:

Intron Rank:

147205

Intron Class:

major

Intron Phase:

Intron Coordinates:

26837777 - 26933040

Intron Length:

95264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTGTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

CTTGTATTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.7

1.05

0.6

92.2

16.3

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

75.3

0.57

0.9

73.8

36.2

Minor 5ss

33.9

-1.8

2.8

41.8

44.8

Minor BPS

47.9

-0

1.9

67.89

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044814

26837615 - 26933938

96324