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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27040531_27040992_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27040531 - 27040992

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGCTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

GTAAAAATAACT

Flanking Amino Acid:

YKRKGRRSSQQKYRRLNKGH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.1

24.3

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

81.3

0.7

0.8

73.6

Minor 5ss

31.8

-2.1

37.8

Minor BPS

45.7

-0.2

66.66

42.5

Associated Gene:

Gene:

HNRNPA3

Ensembl Gene ID:

ENSAPLG00000009620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031163

27040419 - 27049457

9039

ENSAPLT00000010053

27040419 - 27052160

11742