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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27046086_27046197_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27046086 - 27046197

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

AAGTGTTTAAGC

Flanking Amino Acid:

FGRGGNFGGRGGYGGGGGGG

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

29.5

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

0.79

0.9

76.9

42.1

Minor 5ss

32.3

-2

3.3

42.9

44.7

Minor BPS

48.4

-0.1

57.24

41.8

Associated Gene:

Gene:

HNRNPA3

Ensembl Gene ID:

ENSAPLG00000009620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010053

27040419 - 27052160

11742

ENSAPLT00000042521

27040419 - 27049457

9039

ENSAPLT00000031163

27040419 - 27049457

9039

ENSAPLT00000026584

27040419 - 27049457

9039