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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27046279_27047316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27046279 - 27047316

Intron Length:

1038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTATATTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATAT

Flanking Amino Acid:

GGDGYNGFGDGGNYGGGPGY

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

83.2

28.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.8

0.47

1.1

71.4

37.6

Minor 5ss

36.4

-1.5

3.3

45.9

43.7

Minor BPS

60.7

0.41

1.6

78.95

37.3

Associated Gene:

Gene:

HNRNPA3

Ensembl Gene ID:

ENSAPLG00000009620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042521

27040419 - 27049457

9039

ENSAPLT00000031163

27040419 - 27049457

9039

ENSAPLT00000026584

27040419 - 27049457

9039

ENSAPLT00000010053

27040419 - 27052160

11742