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Intron Name: Anas_platyrhynchos_platyrhynchos_7_270462_271063_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

270462 - 271063

Intron Length:

602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATTAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCCATCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

TATTTTTCCATC

Flanking Amino Acid:

SVSLSATGYFRGYNENMDWE

Intron Amino Acid Position:

1145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

86.4

23.9

Major BPS

0.67

1.1

77.7

37.1

Major PPT

80.2

0.68

0.9

79.6

33.1

Minor 5ss

41.2

-1

57.8

46.8

Minor BPS

47.9

-0.1

1.9

62.78

37.4

Associated Gene:

Gene:

AOX1

Ensembl Gene ID:

ENSAPLG00000008708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022758

264624 - 306968

42345

ENSAPLT00000018331

263911 - 307009

43099

ENSAPLT00000009339

268146 - 306968

38823

ENSAPLT00000045156

267812 - 306968

39157

ENSAPLT00000025359

264624 - 306968

42345