Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_27063773_27084605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27063773 - 27084605

Intron Length:

20833

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

ATTTCTATTACA

Flanking Amino Acid:

PARPFPPGCPDMNLIDILWR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.2

Major BPS

68.1

0.45

73.5

28.6

Major PPT

83.9

0.76

0.8

77.7

34.7

Minor 5ss

33.1

-1.9

3.2

43.9

43.7

Minor BPS

0.24

1.9

74.64

36.2

Associated Gene:

Gene:

NFE2L2

Ensembl Gene ID:

ENSAPLG00000010103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033930

27059109 - 27084773

25665