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Intron Name: Anas_platyrhynchos_platyrhynchos_7_271117_272674_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

271117 - 272674

Intron Length:

1558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGAGAC

5'SS Class:

major

3'SS Sequence:

CTATATTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAACAT

U12 Branch Point Sequence:

CTATATTTTACA

Flanking Amino Acid:

KNPKGNWNDWIKEAFEQSVS

Intron Amino Acid Position:

1128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

65.6

34.4

Major BPS

54.4

0.11

61.4

34.3

Major PPT

82.1

0.72

0.9

37.5

Minor 5ss

24.8

-2.9

3.1

24.3

37.2

Minor BPS

52.1

0.06

1.8

64.72

41.4

Associated Gene:

Gene:

AOX1

Ensembl Gene ID:

ENSAPLG00000008708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025359

264624 - 306968

42345

ENSAPLT00000022758

264624 - 306968

42345

ENSAPLT00000018331

263911 - 307009

43099

ENSAPLT00000009339

268146 - 306968

38823

ENSAPLT00000045156

267812 - 306968

39157