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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27129882_27129958_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27129882 - 27129958

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

AACTTGTTAACT

Flanking Amino Acid:

DAEDRVFRAHGHCLHEIFVL

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

81.5

0.71

0.9

78.1

40.1

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

58.6

0.35

2.1

74.86

Associated Gene:

Gene:

AGPS

Ensembl Gene ID:

ENSAPLG00000010251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010738

27119120 - 27162340

43221

ENSAPLT00000040385

27111497 - 27162340

50844

ENSAPLT00000032592

27122437 - 27162340

39904