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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27130034_27132436_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27130034 - 27132436

Intron Length:

2403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

GAAGATGCACTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAATGAA

U12 Branch Point Sequence:

TGTTCTGCAACA

Flanking Amino Acid:

KRIPDIVVWPETARKVTCEF

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

76.8

34.8

Major BPS

55.3

0.13

1.1

47.4

Major PPT

47.5

-0.1

33.6

Minor 5ss

47.6

-0.2

2.8

61.3

44.6

Minor BPS

52.9

0.09

2.2

72.25

39.9

Associated Gene:

Gene:

AGPS

Ensembl Gene ID:

ENSAPLG00000010251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040385

27111497 - 27162340

50844

ENSAPLT00000032592

27122437 - 27162340

39904

ENSAPLT00000010738

27119120 - 27162340

43221