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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27143199_27145515_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27143199 - 27145515

Intron Length:

2317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTGCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAA

U12 Branch Point Sequence:

ATAATCTTAACA

Flanking Amino Acid:

RLVDNAQFQFGHALKPQVAS

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.5

41.9

Major BPS

73.4

0.58

0.9

63.7

35.1

Major PPT

65.7

0.35

66.5

33.4

Minor 5ss

35.3

-1.7

2.7

39.4

40.3

Minor BPS

72.6

0.7

1.2

75.42

35.2

Associated Gene:

Gene:

AGPS

Ensembl Gene ID:

ENSAPLG00000010251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040385

27111497 - 27162340

50844

ENSAPLT00000032592

27122437 - 27162340

39904

ENSAPLT00000010738

27119120 - 27162340

43221