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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27147616_27149372_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27147616 - 27149372

Intron Length:

1757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TCTTTAATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AATTCTTTAATT

Flanking Amino Acid:

KQVYDIATKFGGLAAGEDNG

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

71.4

41.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

83.9

0.76

0.8

78.3

33.7

Minor 5ss

0.64

2.2

73.3

43.5

Minor BPS

81.1

1.05

87.51

31.3

Associated Gene:

Gene:

AGPS

Ensembl Gene ID:

ENSAPLG00000010251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040385

27111497 - 27162340

50844

ENSAPLT00000032592

27122437 - 27162340

39904

ENSAPLT00000010738

27119120 - 27162340

43221