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Intron Name: Anas_platyrhynchos_platyrhynchos_7_2716529_2740842_R

Intron Information:

Intron Rank:

130004

Intron Class:

major

Intron Phase:

Intron Coordinates:

2716529 - 2740842

Intron Length:

24314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCACCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAA

U12 Branch Point Sequence:

CACACCCTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

63.3

0.33

1.1

55.4

41.7

Major PPT

80.7

0.69

0.8

77.2

31.1

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

49.1

-0

1.8

56.92

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026419

2713714 - 2741554

27841