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Intron Name: Anas_platyrhynchos_platyrhynchos_7_272750_273243_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

272750 - 273243

Intron Length:

494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGT

5'SS Class:

strong_major

3'SS Sequence:

GACTTCTCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTATTCTGACTT

Flanking Amino Acid:

GTDVNGMAVKDACQTLMKRL

Intron Amino Acid Position:

1103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.9

36.7

Major BPS

84.4

0.85

34.5

Major PPT

69.2

0.43

67.1

38.9

Minor 5ss

34.5

-1.8

3.1

49.5

46.3

Minor BPS

57.8

0.32

1.7

77.16

39.6

Associated Gene:

Gene:

AOX1

Ensembl Gene ID:

ENSAPLG00000008708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025359

264624 - 306968

42345

ENSAPLT00000022758

264624 - 306968

42345

ENSAPLT00000018331

263911 - 307009

43099

ENSAPLT00000009339

268146 - 306968

38823

ENSAPLT00000045156

267812 - 306968

39157