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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27321999_27338011_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27321999 - 27338011

Intron Length:

16013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

ACTTCCTTATTT

Flanking Amino Acid:

ETVNIPDAYQDRRFNDEIDK

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.2

36.8

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

84.3

0.77

0.9

86.8

24.4

Minor 5ss

30.3

-2.3

3.5

Minor BPS

70.8

0.73

1.6

82.08

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011273

27227397 - 27338782

111386