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Intron Name: Anas_platyrhynchos_platyrhynchos_7_2739026_2741041_F

Intron Information:

Intron Rank:

130298

Intron Class:

major

Intron Phase:

Intron Coordinates:

2739026 - 2741041

Intron Length:

2016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTTCTC

5'SS Class:

major

3'SS Sequence:

TTCCTTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTCTAT

U12 Branch Point Sequence:

TCCTTCTTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

65.3

40.7

Major BPS

61.5

0.29

1.3

62.1

44.1

Major PPT

88.5

0.87

0.6

83.5

Minor 5ss

32.3

-2

3.2

44.4

43.4

Minor BPS

-0.1

1.8

55.39

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042807

2664607 - 2741293

76687

ENSAPLT00000020250

2702938 - 2741293

38356