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Intron Name: Anas_platyrhynchos_platyrhynchos_7_274169_275463_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

274169 - 275463

Intron Length:

1295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACAATA

5'SS Class:

major

3'SS Sequence:

TGTTTGGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAA

U12 Branch Point Sequence:

ACATACAAAACA

Flanking Amino Acid:

ADKTGLSPEKAAALVHIYTD

Intron Amino Acid Position:

952

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

76.9

33.7

Major BPS

60.3

0.26

65.5

Major PPT

0.59

73.5

41.9

Minor 5ss

37.2

-1.5

48.8

46.9

Minor BPS

45.4

-0.3

56.74

Associated Gene:

Gene:

AOX1

Ensembl Gene ID:

ENSAPLG00000008708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025359

264624 - 306968

42345