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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27448132_27450420_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27448132 - 27450420

Intron Length:

2289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

CTTGACTTAATT

Flanking Amino Acid:

LLSASSSENEASDDESYISD

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.9

38.1

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

89.7

0.89

0.7

89.1

27.3

Minor 5ss

44.1

-0.6

3.2

63.6

48.1

Minor BPS

66.5

0.6

1.6

80.51

41.8

Associated Gene:

Gene:

OSBPL6

Ensembl Gene ID:

ENSAPLG00000011717

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022510

27412598 - 27457906

45309

ENSAPLT00000019669

27412692 - 27457906

45215

ENSAPLT00000012319

27412692 - 27457906

45215

ENSAPLT00000028619

27412598 - 27457906

45309