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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27498274_27499317_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27498274 - 27499317

Intron Length:

1044

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTCAGACA

5'SS Class:

weak_major

3'SS Sequence:

TTTTTCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

ATTCTTGAAAGT

Flanking Amino Acid:

SPVSPSPVQMMKRSISHPGP

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.5

0.04

1.2

50.6

39.7

Major BPS

74.6

0.61

65.6

41.4

Major PPT

91.2

0.93

0.6

85.4

29.4

Minor 5ss

27.3

-2.6

3.1

29.7

37.4

Minor BPS

41.1

-0.6

2.3

62.39

42.4

Associated Gene:

Gene:

PLEKHA3

Ensembl Gene ID:

ENSAPLG00000013080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045815

27491146 - 27502593

11448

ENSAPLT00000013638

27493878 - 27502582

8705