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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27499362_27499912_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27499362 - 27499912

Intron Length:

551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCATTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

ATTTACTTACTA

Flanking Amino Acid:

ISHPGPCYSERNNHSVKEPI

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

79.6

0.67

0.8

74.2

35.4

Minor 5ss

43.8

-0.7

2.8

58.6

45.8

Minor BPS

62.2

0.38

1.8

74.71

36.9

Associated Gene:

Gene:

PLEKHA3

Ensembl Gene ID:

ENSAPLG00000013080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045815

27491146 - 27502593

11448

ENSAPLT00000013638

27493878 - 27502582

8705