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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27512890_27514146_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27512890 - 27514146

Intron Length:

1257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATTGAGC

5'SS Class:

major

3'SS Sequence:

ACTCGTAAATCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

TCATCTGAAACT

Flanking Amino Acid:

PTAEVKWYHNVQKEDEVLTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.31

1.1

41.9

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

59.2

0.21

1.1

56.7

41.9

Minor 5ss

38.9

-1.2

3.1

48.9

42.3

Minor BPS

48.9

-0

2.3

71.91

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035404

27510469 - 27514240

3772