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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27513820_27516132_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27513820 - 27516132

Intron Length:

2313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTCTTTACC

5'SS Class:

weak_major

3'SS Sequence:

TCAGAGATATCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCAAAT

U12 Branch Point Sequence:

TCTTCAGTAAGA

Flanking Amino Acid:

DKKYTFESDKATRESLSSYE

Intron Amino Acid Position:

783

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.6

0.09

1.4

55.2

42.1

Major BPS

59.5

0.24

1.2

67.3

37.8

Major PPT

56.4

0.15

1.1

52.2

45.4

Minor 5ss

38.1

-1.3

2.4

39.1

38.9

Minor BPS

47.8

-0.1

2.5

68.02

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034548

27509057 - 27524336

15280