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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27519015_27519113_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27519015 - 27519113

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

ATAGAAAAACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TAATCTTTGAAT

Flanking Amino Acid:

SSVVVMKPPFGQPGQPVASA

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

83.9

0.84

73.9

41.3

Major PPT

48.4

-0

1.1

35.6

43.1

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

66.5

0.6

1.4

77.89

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034548

27509057 - 27524336

15280