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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27520636_27524041_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27520636 - 27524041

Intron Length:

3406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTGCAATTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

AGGAATTTAACT

Flanking Amino Acid:

VTAVTVQDQKDKPSQPGEIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

85.3

32.2

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

73.9

0.54

0.9

69.6

40.3

Minor 5ss

38.9

-1.2

3.1

53.5

43.9

Minor BPS

56.9

0.3

1.6

69.08

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034548

27509057 - 27524336

15280