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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27528205_27528456_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27528205 - 27528456

Intron Length:

252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGAGAAC

5'SS Class:

weak_major

3'SS Sequence:

GAAGGAAACTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGTGAC

U12 Branch Point Sequence:

TGAGGCTGAAGG

Flanking Amino Acid:

KQLTFTVEGLRVTIKTTKDR

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.1

55.1

37.7

Major BPS

54.8

0.12

1.1

46.8

37.9

Major PPT

39.2

-0.6

1.6

29.9

40.2

Minor 5ss

25.2

-2.8

3.3

29.2

38.7

Minor BPS

41.7

-0.7

2.2

45.66

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022307

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017715

27526560 - 27529695

3136