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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27537315_27538015_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27537315 - 27538015

Intron Length:

701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TACTTCAAAAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TATACAATAAAT

Flanking Amino Acid:

CETKEGTKITDNIFNDLKIF

Intron Amino Acid Position:

1019

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

Major BPS

65.7

0.39

71.3

30.3

Major PPT

47.1

-0.1

1.7

52.3

40.4

Minor 5ss

53.1

0.1

2.3

69.7

41.2

Minor BPS

49.5

0.04

74.41

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026806

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037125

27536465 - 27541133

4669

ENSAPLT00000042441

27536680 - 27541133

4454