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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27537675_27538297_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27537675 - 27538297

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCCCACCAT

5'SS Class:

weak_major

3'SS Sequence:

TTGTTGTTGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

AGCTGTTAAACT

Flanking Amino Acid:

TLVVKVLDTPEKPSPPEKLG

Intron Amino Acid Position:

1029

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.2

0.01

1.2

43.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

76.8

0.6

1.1

76.9

42.1

Minor 5ss

23.1

-3.1

35.5

43.1

Minor BPS

48.5

-0

2.1

66.31

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026806

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043915

27532220 - 27541649

9430

ENSAPLT00000022580

27532220 - 27544382

12163