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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27539778_27542777_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27539778 - 27542777

Intron Length:

3000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGGGTGGC

5'SS Class:

major

3'SS Sequence:

AGATGATGTAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

GTGACTGTAAAA

Flanking Amino Acid:

GGHYTLNLRNAPRIMMDVKF

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.1

60.5

38.2

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

-0.2

1.7

46.1

Minor 5ss

28.6

-2.5

3.4

40.7

Minor BPS

46.5

-0.2

2.1

57.9

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026806

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022580

27532220 - 27544382

12163