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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27545717_27550565_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27545717 - 27550565

Intron Length:

4849

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCAGACTAC

5'SS Class:

weak_major

3'SS Sequence:

GGTGAGCCATTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

TGGCAGTTAACA

Flanking Amino Acid:

VFWHKDNVALKICASNDEKS

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.8

0.23

1.2

50.8

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

-0

45.2

42.2

Minor 5ss

33.5

-1.9

4.3

48.3

42.8

Minor BPS

48.3

-0.1

2.2

62.81

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026806

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035637

27545602 - 27553540

7939