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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27550643_27551512_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27550643 - 27551512

Intron Length:

870

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCCTGCTGT

5'SS Class:

weak_major

3'SS Sequence:

TCTAGCAGGAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TACTATTTACCA

Flanking Amino Acid:

AELRKVVTIRDLKVDVPFVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.3

49.2

46.7

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

43.6

-0.3

1.7

42.5

Minor 5ss

36.3

-1.6

47.3

48.1

Minor BPS

53.5

0.11

1.8

65.06

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026806

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020659

27547048 - 27556472

9425