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Intron Name: Anas_platyrhynchos_platyrhynchos_7_275656_277332_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

275656 - 277332

Intron Length:

1677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TTCTATATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTATCTATACCT

Flanking Amino Acid:

GGCTPDESVLVAEVSLLKMD

Intron Amino Acid Position:

888

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

80.5

33.7

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

0.77

0.8

81.6

34.4

Minor 5ss

-1.6

3.3

45.4

43.9

Minor BPS

59.3

0.37

1.9

81.68

39.8

Associated Gene:

Gene:

AOX1

Ensembl Gene ID:

ENSAPLG00000008708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025359

264624 - 306968

42345

ENSAPLT00000022758

264624 - 306968

42345

ENSAPLT00000018331

263911 - 307009

43099

ENSAPLT00000009339

268146 - 306968

38823

ENSAPLT00000045156

267812 - 306968

39157