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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27649924_27650242_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27649924 - 27650242

Intron Length:

319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TTGTCTTTCAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTGTCTTTCAAA

Flanking Amino Acid:

PKKVEAPQAKVPEVQKKATF

Intron Amino Acid Position:

5414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.5

Major BPS

90.7

1.01

0.7

19.9

Major PPT

72.6

0.51

74.3

34.3

Minor 5ss

70.5

0.69

2.2

81.8

38.5

Minor BPS

58.4

0.26

1.9

72.11

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048321

27647096 - 27747675

100580

ENSAPLT00000045042

27647096 - 27747675

100580