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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27652978_27653249_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27652978 - 27653249

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTGAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTTTCTTTGAAG

Flanking Amino Acid:

HREEEYSFVTEPTEHEKTVE

Intron Amino Acid Position:

5208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.9

33.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

0.7

82.8

26.1

Minor 5ss

34.9

-1.7

2.8

43.6

43.5

Minor BPS

70.8

0.51

1.4

75.57

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048321

27647096 - 27747675

100580

ENSAPLT00000045042

27647096 - 27747675

100580