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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27654786_27655362_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27654786 - 27655362

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGACTT

5'SS Class:

strong_major

3'SS Sequence:

TAATCACTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TATATATTAATC

Flanking Amino Acid:

KEKKEVTVHKVVKKPVEEKV

Intron Amino Acid Position:

5132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

74.2

0.54

0.9

66.3

39.3

Minor 5ss

-0.7

3.1

65.1

46.1

Minor BPS

59.9

0.29

1.6

69.35

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045042

27647096 - 27747675

100580

ENSAPLT00000048321

27647096 - 27747675

100580