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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27656544_27656808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27656544 - 27656808

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTGTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

KGPEDVQQPKVPEVLPEKPK

Intron Amino Acid Position:

5016

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.1

28.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

73.8

0.54

1.1

79.3

38.2

Minor 5ss

39.8

-1.1

2.8

50.7

45.7

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048321

27647096 - 27747675

100580

ENSAPLT00000045042

27647096 - 27747675

100580