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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27657060_27657992_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27657060 - 27657992

Intron Length:

933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCATAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTATTCTAAATA

Flanking Amino Acid:

VAVPPQKTAEATPIPILLPL

Intron Amino Acid Position:

4972

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.9

32.9

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

74.5

0.55

81.2

29.6

Minor 5ss

35.9

-1.6

3.3

46.4

48.9

Minor BPS

66.4

0.51

1.6

75.44

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048321

27647096 - 27747675

100580

ENSAPLT00000045042

27647096 - 27747675

100580