Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_27665317_27665915_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27665317 - 27665915

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGAAC

5'SS Class:

major

3'SS Sequence:

TCTTTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTCACA

Flanking Amino Acid:

DSCTAQLNVKERKTPPTFTK

Intron Amino Acid Position:

4265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

66.1

39.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.6

0.91

0.6

86.8

Minor 5ss

31.6

-2.1

3.3

42.7

44.4

Minor BPS

63.3

0.41

1.7

73.92

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048321

27647096 - 27747675

100580

ENSAPLT00000045042

27647096 - 27747675

100580