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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27668646_27669125_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27668646 - 27669125

Intron Length:

480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TAAACAACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTATGTTTAAAC

Flanking Amino Acid:

SSCTASVHVSDRIIPPSFTR

Intron Amino Acid Position:

3698

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

35.8

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

61.8

0.27

Minor 5ss

35.9

-1.6

2.6

42.1

44.4

Minor BPS

60.5

0.31

1.9

72.33

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048321

27647096 - 27747675

100580

ENSAPLT00000045042

27647096 - 27747675

100580