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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27677539_27680928_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27677539 - 27680928

Intron Length:

3390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTCTTTTGT

5'SS Class:

weak_major

3'SS Sequence:

GTAGACATCAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

CTCAGATTAATA

Flanking Amino Acid:

FFSFPLEIPCETRQELVVGV

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.3

0.13

1.3

56.9

42.6

Major BPS

0.6

1.2

75.9

36.3

Major PPT

45.2

-0.2

1.7

43.1

41.7

Minor 5ss

43.6

-0.7

2.6

56.5

42.7

Minor BPS

46.5

-0.2

56.66

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017682

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037063

27677462 - 27686369

8908