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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27679188_27679351_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27679188 - 27679351

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCAGGTGTG

5'SS Class:

major

3'SS Sequence:

AGAACCCAAGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

GTTTCTAGAACC

Flanking Amino Acid:

TATSSAKLTVAPIFDAKPES

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

1.1

75.2

37.8

Major BPS

0.42

1.3

60.1

46.3

Major PPT

49.6

-0

1.1

41.9

37.7

Minor 5ss

24.7

-2.9

4.2

35.9

42.5

Minor BPS

59.1

0.27

1.7

73.35

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017682

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018926

27676096 - 27680618

4523