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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27687984_27692242_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27687984 - 27692242

Intron Length:

4259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGTTAGAA

5'SS Class:

weak_major

3'SS Sequence:

ACAGTTTTTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAGAAC

U12 Branch Point Sequence:

CCTGCTAGAACC

Flanking Amino Acid:

YKISKVENKHRIENISSLRG

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.7

0.16

1.1

54.9

30.8

Major BPS

46.3

-0.2

1.4

53.4

38.7

Major PPT

64.2

0.32

1.1

63.9

41.1

Minor 5ss

32.9

-2

3.4

41.7

45.3

Minor BPS

46.3

-0.3

1.8

55.45

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027892

27687696 - 27696786

9091