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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27689460_27692242_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27689460 - 27692242

Intron Length:

2783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGTTAGAA

5'SS Class:

weak_major

3'SS Sequence:

CTCTTGGTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

CTTCCAATGACC

Flanking Amino Acid:

YKISKVENKHQDTEITSSAK

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.7

0.16

1.1

54.9

30.8

Major BPS

71.8

0.54

1.2

32.5

Major PPT

67.4

0.39

1.1

70.5

39.1

Minor 5ss

32.9

-2

3.4

41.7

45.3

Minor BPS

-0

1.9

65.95

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020822

27689238 - 27696786

7549