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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27692521_27696227_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27692521 - 27696227

Intron Length:

3707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGGCTG

5'SS Class:

major

3'SS Sequence:

TTTTGCTTAAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTCAC

U12 Branch Point Sequence:

TTTTGCTTAAAA

Flanking Amino Acid:

LYTCRAVSTLVSAPSCSLSL

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

60.4

45.8

Major BPS

1.2

54.6

40.8

Major PPT

70.1

0.45

1.1

72.1

Minor 5ss

28.5

-2.5

3.3

30.2

42.9

Minor BPS

72.1

0.69

1.8

84.76

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027892

27687696 - 27696786

9091

ENSAPLT00000020822

27689238 - 27696786

7549